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The Concatenate filter fuses consecutive blocks until the concatenated block reaches a minimal size.
maf.filter= \
[...],
Concatenate(minimum_size=10000, ref_species=Hsapiens), \
[...]
|
minimum_size={int}The minimum size for the blocks to be reached.
ref_species={string}If given, only blocks with identical chromosome tags in the reference species will be merged.