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SiteStatistics computes site-wise statistics, including:
The statistics are computed for a given subset of species (typically forming a ingroup).
maf.filter= \
[...],
SequenceStatistics( \
statistics=(\ \
[...],
SiteStatistics( \
species=species1), \
[...]), \
ref_species=species1, \
file=data.statistics.csv), \
[...]
|
species={list}A list of species to be considered in the statistics calculations.