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Performs hierarchical clustering from a previously computed distance matrix.
maf.filter= \
[...],
DistanceBasedPhylogeny( \
method=bionj, \
dist_mat=MLDistance), \
[...]
|
method={string}Method to use for reconstructing the tree:
upgmaUnweighted pair group method using arithmetic means
wpgmaWeighted pair group method using aritmetic means
njNeighbor-Joining (Saitou and Nei, 1987)
bionjBioNJ method (Gascuel, 1997)
dist_mat={string}The tag name of the distance matrix to use.
UPGMA|WPGMA|NJ|BioNJThe resulting tree.